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Cis-eQTLs across different cancer types

In cis-eQTL analysis, we identified 5,606,570 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

 

e.g., "STAD"
e.g., "rs2351010"
e.g., "ERAP2"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs34198346 chr7:97327547 G/A SHFM1 chr7:96125596-96339203:- 0.81 5.24 3.0E-6 Box Plot
ACC rs34201260 chr7:64532354 A/G INTS4L1 chr7:64601603-64694600:+ 0.7 5.19 3.52E-6 Box Plot
ACC rs34221182 chr19:52881360 G/A ZNF880 chr19:52873170-52889048:+ 0.81 7.12 3.17E-9 Box Plot
ACC rs34232542 chr14:74606782 C/CTT LIN52 chr14:74551499-74667938:+ 0.43 5.2 3.42E-6 Box Plot
ACC rs34248620 chr7:98203847 G/A TRRAP chr7:98475556-98610866:+ 1.13 5.39 1.74E-6 Box Plot
ACC rs34252185 chr2:99737646 A/G TSGA10 chr2:99613724-99771427:- 0.55 5.37 1.85E-6 Box Plot
ACC rs34256783 chr20:45152940 A/G LOC100240726 chr20:45092301-45093931:- 0.67 5.45 1.41E-6 Box Plot
ACC rs34270993 chr8:71645268 G/C XKR9 chr8:71581600-71702606:+ 0.71 6.74 1.29E-8 Box Plot
ACC rs34272114 chr2:99737443 A/C TSGA10 chr2:99613724-99771427:- 0.56 5.47 1.29E-6 Box Plot
ACC rs34282253 chr8:71582366 A/G XKR9 chr8:71581600-71702606:+ 0.66 6.72 1.37E-8 Box Plot
ACC rs34351710 chr8:71608019 A/G XKR9 chr8:71581600-71702606:+ 0.7 6.06 1.55E-7 Box Plot
ACC rs34356347 chr14:64390238 G/A SYNE2 chr14:64319701-64693151:+ 1.01 5.25 2.85E-6 Box Plot
ACC rs34365165 chr16:24856208 G/A SLC5A11 chr16:24857162-24922949:+ 1.03 5.39 1.75E-6 Box Plot
ACC rs34383742 chr2:99723016 TA/T TSGA10 chr2:99613724-99771427:- 0.6 5.77 4.42E-7 Box Plot
ACC rs34409123 chr8:71662116 A/G XKR9 chr8:71581600-71702606:+ 0.71 6.74 1.29E-8 Box Plot